ECMM Council and Board are the ruling organs of Confederation.
Below is the list of the current ECMM Council and Board Members.
| President | Dr. Jacques F.G.M. Meis | Netherlands |
| General Secretary | Dr. George Petrikkos | Greece |
| Treasurer | Prof. Cornelia Lass-Flörl | Austria |
| Mycology Newsletter Editor | Prof. Maria Anna Viviani | Italy |
| Dr. Maiken Cavling Arendrup | Denmark | |
| Dr. Israela Berdicevsky | Israel | |
| Prof. Bertrand Dupont | France | |
| Dr. Elizabeth M. Johnson | United Kingdom | |
| Prof. Todor Kantardjiev | Bulgaria | |
| Dr. Lena Klingspor | Sweden | |
| Dr. Pentti Kuusela | Finland | |
| Dr. Katrien Lagrou | Belgium | |
| Prof. Martin Schaller | Germany | |
| Dr. Mihai Mares | Romania | |
| Dr. Karel Mencl | Czech Republic | |
| Prof. Ladislav Ozegovic | Bosnia and Hercegovina | |
| Prof. Javier Pemán García | Spain | |
| Dr. João Brandão | Portugal | |
| Prof. Alexey Y. Sergeev | Russian Federation | |
| Dr. Gyula Simon | Hungary | |
| Dr. Jørgen Stenderup | Denmark | |
| Prof. Jacek C. Szepietowski | Poland | |
| Prof. Sevtap Arikan | Turkey |